STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB42309.1O-succinylbenzoic acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)    
Predicted Functional Partners:
menB
1,4-dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
 
  
 0.988
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
 
 
  0.971
ORB32747.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.920
ORB42310.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.883
ORB32128.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.881
ORB38379.1
1,4-dihydroxy-6-naphthoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.867
ORB37239.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.864
ORB42308.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.855
ORB45706.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.854
ORB40915.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.854
Your Current Organism:
Mycobacterium paraseoulense
NCBI taxonomy Id: 590652
Other names: DSM 45000, JCM 16952, KCTC 19145, M. paraseoulense, Mycobacterium paraseoulense Lee et al. 2010, Mycobacterium sp. 31118, strain 31118
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