STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB39679.1NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)    
Predicted Functional Partners:
ORB28548.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.726
ORB38085.1
3,4-dihydroxyphthalate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.669
ORB39680.1
LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.608
ORB42978.1
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.592
ORB34770.1
Fuculose phosphate aldolase; Catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.592
ORB39678.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.573
ORB37921.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.504
ORB37922.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.504
ORB37708.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.469
ORB36752.1
Band 7 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.469
Your Current Organism:
Mycobacterium paraseoulense
NCBI taxonomy Id: 590652
Other names: DSM 45000, JCM 16952, KCTC 19145, M. paraseoulense, Mycobacterium paraseoulense Lee et al. 2010, Mycobacterium sp. 31118, strain 31118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.