STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB39163.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (935 aa)    
Predicted Functional Partners:
ORB41049.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
ORB37453.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.989
ORB29769.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.975
ORB33789.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.929
ORB36793.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.912
ORB33453.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.908
ORB36787.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.899
ORB33723.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.897
ORB43840.1
Riboflavin biosynthesis protein RibA; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the DHBP synthase family.
    
 0.837
ribBA
Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.837
Your Current Organism:
Mycobacterium paraseoulense
NCBI taxonomy Id: 590652
Other names: DSM 45000, JCM 16952, KCTC 19145, M. paraseoulense, Mycobacterium paraseoulense Lee et al. 2010, Mycobacterium sp. 31118, strain 31118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.