STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB38429.1Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)    
Predicted Functional Partners:
ORB38388.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.981
ORB38382.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.979
ORB38383.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.972
ORB42207.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
ORB38384.1
MCE-family protein MCE3A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.957
ORB43848.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.941
ORB41023.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.941
ORB40306.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.940
ORB38430.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.933
ORB39835.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.928
Your Current Organism:
Mycobacterium paraseoulense
NCBI taxonomy Id: 590652
Other names: DSM 45000, JCM 16952, KCTC 19145, M. paraseoulense, Mycobacterium paraseoulense Lee et al. 2010, Mycobacterium sp. 31118, strain 31118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.