STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB37963.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)    
Predicted Functional Partners:
ORB37961.1
VWA containing CoxE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.964
ORB37962.1
Membrane oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.964
ORB37965.1
Carbon-monoxide dehydrogenase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.941
ORB37967.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.939
ORB37964.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.924
ORB37966.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.881
ORB37968.1
XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.840
ORB45695.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.775
ORB37969.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
  
 0.758
ORB35898.1
Amino acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.694
Your Current Organism:
Mycobacterium paraseoulense
NCBI taxonomy Id: 590652
Other names: DSM 45000, JCM 16952, KCTC 19145, M. paraseoulense, Mycobacterium paraseoulense Lee et al. 2010, Mycobacterium sp. 31118, strain 31118
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.