Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB37492.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)    
Predicted Functional Partners:
ORB37467.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.991
ORB37469.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.979
ORB37466.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.964
ORB37468.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.899
ORB37470.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.787
ORB37471.1
RDD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.782
ORB37491.1
glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.745
ORB35898.1
Amino acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.547
ORB45489.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.546
ORB43988.1
MorD protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.546
Your Current Organism:
Mycobacterium paraseoulense
NCBI taxonomy Id: 590652
Other names: DSM 45000, JCM 16952, KCTC 19145, M. paraseoulense, Mycobacterium paraseoulense Lee et al. 2010, Mycobacterium sp. 31118, strain 31118
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