STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB33679.1Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)    
Predicted Functional Partners:
ORB33662.1
Mce protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.868
ORB28548.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.867
ORB33664.1
Mce protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.855
BST39_26445
Glutamine ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.854
ORB33665.1
DUF1275 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.836
ORB45706.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.819
ORB40915.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.819
ORB39182.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.819
ORB33916.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.819
ORB45882.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.814
Your Current Organism:
Mycobacterium paraseoulense
NCBI taxonomy Id: 590652
Other names: DSM 45000, JCM 16952, KCTC 19145, M. paraseoulense, Mycobacterium paraseoulense Lee et al. 2010, Mycobacterium sp. 31118, strain 31118
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.