STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB33591.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (301 aa)    
Predicted Functional Partners:
BST39_07140
Hypothetical protein; Internal stop; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.963
ORB45956.1
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.955
ORB45316.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.952
ORB46403.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.948
ORB33604.1
Short chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.948
ORB33588.1
CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.913
ORB33590.1
enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.908
ORB33589.1
Acyl CoA--acetate/3-ketoacid CoA transferase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.890
ORB33587.1
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.835
ORB44013.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.768
Your Current Organism:
Mycobacterium paraseoulense
NCBI taxonomy Id: 590652
Other names: DSM 45000, JCM 16952, KCTC 19145, M. paraseoulense, Mycobacterium paraseoulense Lee et al. 2010, Mycobacterium sp. 31118, strain 31118
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