STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_0098KEGG: band 7 protein; PFAM: band 7 protein; SMART: band 7 protein. (320 aa)    
Predicted Functional Partners:
Celf_0099
KEGG: hypothetical protein.
 
  
 0.982
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.866
Celf_3460
KEGG: AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase; Belongs to the AAA ATPase family.
   
 0.866
Celf_2032
PFAM: protein of unknown function DUF28; KEGG: protein of unknown function DUF28.
 
 
    0.651
Celf_1191
PFAM: protein of unknown function DUF1684; KEGG: xce:Xcel_3099 protein of unknown function DUF1684.
 
   
 0.617
Celf_0023
KEGG: xce:Xcel_0012 rhomboid family protein; manually curated; PFAM: Rhomboid family protein.
   
 0.590
arc
KEGG: AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
   
 
 0.526
Celf_0100
PFAM: Polyketide cyclase/dehydrase; KEGG: ank:AnaeK_1617 hypothetical protein.
       0.524
Celf_0094
KEGG: fal:FRAAL5379 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
     
 0.520
Celf_0093
Hypothetical protein; KEGG: scb:SCAB_61491 putative sensor kinase.
       0.519
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.