STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_0126PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cmi:CMM_2730 putative sugar ABC transporter, permease component. (318 aa)    
Predicted Functional Partners:
Celf_0127
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cms:CMS_2716 putative integral membrane transport protein.
   0.968
Celf_0128
PFAM: extracellular solute-binding protein family 1; KEGG: cmi:CMM_2733 putative sugar ABC transporter, substrate binding protein.
 
   0.943
Celf_0900
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_0511 binding-protein-dependent transport systems inner membrane component.
   0.862
Celf_3629
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC-type sugar transport system, permease component.
   0.862
Celf_3323
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_0899 binding-protein-dependent transport systems inner membrane component.
   0.860
Celf_3335
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: carbohydrate ABC transporter membrane protein.
   0.859
Celf_3250
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cms:CMS_0053 putative integral membrane binding-protein-dependent transport protein.
   0.854
Celf_1279
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_0065 binding-protein-dependent transport systems inner membrane component.
   0.819
Celf_0884
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scb:SCAB_7351 putative integral membrane transport protein.
   0.815
Celf_1288
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component.
   0.780
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.