Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Celf_0145 | Celf_0146 | TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: ATP-dependent DNA helicase, RecQ family; SMART: DEAD-like helicase; helicase domain protein. | PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: saq:Sare_3168 activator of HSP90 ATPase 1 family protein. | 0.556 |
Celf_0145 | Celf_0147 | TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: ATP-dependent DNA helicase, RecQ family; SMART: DEAD-like helicase; helicase domain protein. | SMART: regulatory protein ArsR; KEGG: acp:A2cp1_3956 regulatory protein ArsR. | 0.556 |
Celf_0145 | Celf_0148 | TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: ATP-dependent DNA helicase, RecQ family; SMART: DEAD-like helicase; helicase domain protein. | PFAM: Protein of unknown function DUF2174-like; KEGG: protein of unknown function DUF2174-like protein. | 0.413 |
Celf_0146 | Celf_0145 | PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: saq:Sare_3168 activator of HSP90 ATPase 1 family protein. | TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: ATP-dependent DNA helicase, RecQ family; SMART: DEAD-like helicase; helicase domain protein. | 0.556 |
Celf_0146 | Celf_0147 | PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: saq:Sare_3168 activator of HSP90 ATPase 1 family protein. | SMART: regulatory protein ArsR; KEGG: acp:A2cp1_3956 regulatory protein ArsR. | 0.821 |
Celf_0146 | Celf_0148 | PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: saq:Sare_3168 activator of HSP90 ATPase 1 family protein. | PFAM: Protein of unknown function DUF2174-like; KEGG: protein of unknown function DUF2174-like protein. | 0.557 |
Celf_0147 | Celf_0145 | SMART: regulatory protein ArsR; KEGG: acp:A2cp1_3956 regulatory protein ArsR. | TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: ATP-dependent DNA helicase, RecQ family; SMART: DEAD-like helicase; helicase domain protein. | 0.556 |
Celf_0147 | Celf_0146 | SMART: regulatory protein ArsR; KEGG: acp:A2cp1_3956 regulatory protein ArsR. | PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: saq:Sare_3168 activator of HSP90 ATPase 1 family protein. | 0.821 |
Celf_0147 | Celf_0148 | SMART: regulatory protein ArsR; KEGG: acp:A2cp1_3956 regulatory protein ArsR. | PFAM: Protein of unknown function DUF2174-like; KEGG: protein of unknown function DUF2174-like protein. | 0.557 |
Celf_0148 | Celf_0145 | PFAM: Protein of unknown function DUF2174-like; KEGG: protein of unknown function DUF2174-like protein. | TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: ATP-dependent DNA helicase, RecQ family; SMART: DEAD-like helicase; helicase domain protein. | 0.413 |
Celf_0148 | Celf_0146 | PFAM: Protein of unknown function DUF2174-like; KEGG: protein of unknown function DUF2174-like protein. | PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: saq:Sare_3168 activator of HSP90 ATPase 1 family protein. | 0.557 |
Celf_0148 | Celf_0147 | PFAM: Protein of unknown function DUF2174-like; KEGG: protein of unknown function DUF2174-like protein. | SMART: regulatory protein ArsR; KEGG: acp:A2cp1_3956 regulatory protein ArsR. | 0.557 |
Celf_0148 | Celf_1472 | PFAM: Protein of unknown function DUF2174-like; KEGG: protein of unknown function DUF2174-like protein. | KEGG: ach:Achl_0639 transcriptional regulator, MerR family; PFAM: TipAS antibiotic-recognition domain-containing protein; regulatory protein MerR; SMART: regulatory protein MerR. | 0.519 |
Celf_1472 | Celf_0148 | KEGG: ach:Achl_0639 transcriptional regulator, MerR family; PFAM: TipAS antibiotic-recognition domain-containing protein; regulatory protein MerR; SMART: regulatory protein MerR. | PFAM: Protein of unknown function DUF2174-like; KEGG: protein of unknown function DUF2174-like protein. | 0.519 |