STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_0227KEGG: heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase. (869 aa)    
Predicted Functional Partners:
Celf_0228
PFAM: Heavy metal transport/detoxification protein; KEGG: heavy metal transport/detoxification protein.
 
 
 0.950
Celf_0229
PFAM: protein of unknown function DUF156; KEGG: protein of unknown function DUF156.
 
  
 0.888
Celf_2052
KEGG: copper-translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase.
 
 
0.778
Celf_3471
KEGG: scb:SCAB_16151 hypothetical protein.
  
 
 0.734
Celf_1338
KEGG: nitrite reductase (NO-forming); PFAM: multicopper oxidase type 3.
 
 
 0.686
Celf_0130
KEGG: xce:Xcel_3334 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein.
  
  
 0.652
Celf_2285
KEGG: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Carbamoyl-phosphate synthetase large chain oligomerisation; Rhodanese domain protein; SMART: Rhodanese domain protein.
  
  
 0.645
Celf_2287
PFAM: protein of unknown function DUF156; KEGG: protein of unknown function DUF156.
  
  
 0.630
Celf_1916
PFAM: Ferritin Dps family protein; KEGG: ferritin Dps family protein; Belongs to the Dps family.
  
  
 0.627
Celf_0259
PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: cytochrome c oxidase caa3-type, assembly factor CtaG-related protein.
     
 0.617
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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