STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_0272KEGG: saq:Sare_4058 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase. (350 aa)    
Predicted Functional Partners:
Celf_0271
PFAM: Patatin; KEGG: stp:Strop_3682 patatin.
 
     0.962
Celf_3363
KEGG: hypothetical protein.
  
     0.635
Celf_3360
KEGG: lipoprotein.
  
    0.617
Celf_1518
PFAM: phosphatidate cytidylyltransferase; KEGG: phosphatidate cytidylyltransferase.
    
 0.552
Celf_0270
KEGG: xce:Xcel_2244 chitin-binding domain 3 protein; PFAM: chitin-binding domain 3 protein; cellulose-binding family II; SMART: cellulose-binding family II.
       0.475
Celf_1566
KEGG: type I phosphodiesterase/nucleotide pyrophosphatase.
  
    0.468
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.