STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_0317PFAM: glycosyltransferase 36; glycosyltransferase 36 associated; carbohydrate binding; KEGG: glycosyltransferase 36. (822 aa)    
Predicted Functional Partners:
Celf_1924
KEGG: ami:Amir_3216 glycoside hydrolase family 5; PFAM: glycoside hydrolase family 5; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein.
 
  
 0.938
Celf_0140
PFAM: glycoside hydrolase family 3 domain protein; KEGG: sgr:SGR_3126 putative beta-glucosidase.
 
  
 0.925
Celf_0376
Cellulase; KEGG: xce:Xcel_0182 cellulase; PFAM: glycoside hydrolase family 5; protein of unknown function DUF291; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.925
Celf_1481
PFAM: glycoside hydrolase family 9; KEGG: glycoside hydrolase family 9.
  
  
  0.922
Celf_2783
TIGRFAM: beta-galactosidase; KEGG: beta-galactosidase; PFAM: glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
    
 0.921
Celf_2791
PFAM: glycoside hydrolase family 3 domain protein; KEGG: bcv:Bcav_1318 beta-glucosidase.
 
  
 0.921
cenC
Glycoside hydrolase family 9; The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: (1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the disaccharide cellobiose from the non-reducing end of the cellulose polymer chain; (3) Beta-1,4-glucosidases which hydrolyze the cellobiose and other short cello-oligosaccharides to glucose; Belongs to the glycosyl hydrolase 9 (cellulase E) family.
  
  
  0.920
Celf_1705
PFAM: glycoside hydrolase family 9; Carbohydrate-binding CenC domain protein; KEGG: glycoside hydrolase family 9.
  
  
  0.920
Celf_0019
KEGG: glycoside hydrolase family 9; PFAM: glycoside hydrolase family 9; cellulose-binding family II; Fibronectin type III domain protein; type 3a cellulose-binding domain protein; SMART: cellulose-binding family II; Fibronectin type III domain protein.
  
  
  0.919
Celf_0045
KEGG: glycoside hydrolase family 9; PFAM: glycoside hydrolase family 9; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein.
  
  
  0.918
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.