STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_0331KEGG: monovalent cation/proton antiporter, MnhG/PhaG subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit. (145 aa)    
Predicted Functional Partners:
Celf_0326
PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; KEGG: NADH/ubiquinone/plastoquinone (complex I).
 
 
 0.999
Celf_0327
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: NADH-ubiquinone oxidoreductase chain 4L.
 
 
 0.999
Celf_0328
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: NADH/ubiquinone/plastoquinone (complex I).
 
 
 0.999
Celf_0329
KEGG: multisubunit Na+/H+ antiporter MnhE subunit.
 
 
 0.999
Celf_0330
KEGG: multiple resistance and pH regulation protein F.
 
 
 0.999
Celf_0944
KEGG: proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein.
 
 
 0.908
Celf_0332
PFAM: FAD dependent oxidoreductase; KEGG: FAD dependent oxidoreductase.
       0.623
Celf_0325
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: protein of unknown function DUF224 cysteine-rich region domain protein.
       0.506
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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