STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_0367PFAM: major facilitator superfamily MFS_1; KEGG: scb:SCAB_84451 putative integral membrane protein. (419 aa)    
Predicted Functional Partners:
Celf_0366
Regulatory protein ArsR; KEGG: mab:MAB_2602c ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
     0.941
Celf_0365
PFAM: regulatory protein TetR; KEGG: transcriptional regulator, TetR family.
       0.554
Celf_0368
KEGG: HemY domain-containing protein.
       0.527
Celf_0364
KEGG: cms:CMS_0370 putative integral membrane protein.
   
   0.459
Celf_1412
KEGG: GCN5-related protein N-acetyltransferase.
   
    0.445
Celf_2994
KEGG: mycothiol-dependent maleylpyruvate isomerase.
  
     0.432
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.