STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_0529PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: carbohydrate ABC transporter membrane protein. (297 aa)    
Predicted Functional Partners:
Celf_0528
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: carbohydrate ABC transporter membrane protein.
 
   0.968
Celf_0527
PFAM: extracellular solute-binding protein family 1; KEGG: kfl:Kfla_1816 extracellular solute-binding protein family 1.
 
 0.928
Celf_0883
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scb:SCAB_7341 putative integral membrane transport protein.
   0.866
Celf_3251
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bfa:Bfae_29410 carbohydrate ABC transporter membrane protein.
 
 0.859
Celf_1278
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kfl:Kfla_4674 binding-protein-dependent transport systems inner membrane component.
 
 0.855
Celf_0882
PFAM: extracellular solute-binding protein family 1; KEGG: scb:SCAB_7331 putative substrate-binding transport lipoprotein.
 
 0.838
Celf_1289
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component.
 
 0.825
Celf_2728
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_2071 binding-protein-dependent transport systems inner membrane component.
 
 0.823
Celf_2978
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scb:SCAB_84771 putative binding-protein-dependent transport protein.
 
 0.819
Celf_0901
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_0512 binding-protein-dependent transport systems inner membrane component.
 
 0.810
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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