Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Celf_0623 | Celf_0624 | KEGG: nca:Noca_0196 periplasmic binding protein/LacI transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI. | KEGG: sna:Snas_2719 hypothetical protein. | 0.773 |
Celf_0623 | Celf_0625 | KEGG: nca:Noca_0196 periplasmic binding protein/LacI transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI. | KEGG: two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver. | 0.527 |
Celf_0623 | Celf_1811 | KEGG: nca:Noca_0196 periplasmic binding protein/LacI transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI. | KEGG: glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein. | 0.652 |
Celf_0623 | Celf_2786 | KEGG: nca:Noca_0196 periplasmic binding protein/LacI transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI. | KEGG: transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI. | 0.766 |
Celf_0624 | Celf_0623 | KEGG: sna:Snas_2719 hypothetical protein. | KEGG: nca:Noca_0196 periplasmic binding protein/LacI transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI. | 0.773 |
Celf_0624 | Celf_0625 | KEGG: sna:Snas_2719 hypothetical protein. | KEGG: two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver. | 0.527 |
Celf_0625 | Celf_0623 | KEGG: two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver. | KEGG: nca:Noca_0196 periplasmic binding protein/LacI transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI. | 0.527 |
Celf_0625 | Celf_0624 | KEGG: two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver. | KEGG: sna:Snas_2719 hypothetical protein. | 0.527 |
Celf_1811 | Celf_0623 | KEGG: glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein. | KEGG: nca:Noca_0196 periplasmic binding protein/LacI transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI. | 0.652 |
Celf_1811 | Celf_2786 | KEGG: glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein. | KEGG: transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI. | 0.652 |
Celf_2786 | Celf_0623 | KEGG: transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI. | KEGG: nca:Noca_0196 periplasmic binding protein/LacI transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI. | 0.766 |
Celf_2786 | Celf_1811 | KEGG: transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI. | KEGG: glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein. | 0.652 |