STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_0728KEGG: bfs:BF3461 hypothetical protein. (400 aa)    
Predicted Functional Partners:
Celf_0722
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: xce:Xcel_2926 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.866
Celf_0725
PFAM: polysaccharide biosynthesis protein; KEGG: pen:PSEEN1497 polysaccharide biosynthesis protein involved O-antigen biosynthesis protein.
  
  
 0.810
Celf_0723
KEGG: xal:XALc_2689 hypothetical protein.
       0.791
Celf_0726
PFAM: glycosyl transferase family 2; KEGG: ach:Achl_2418 glycosyl transferase family 2.
  
    0.786
Celf_0727
PFAM: glycosyl transferase family 2; KEGG: gvi:glr3790 glucosyltransferase.
       0.781
Celf_0724
Hypothetical protein; KEGG: mtp:Mthe_0963 putative transmembrane protein.
       0.773
Celf_0721
TIGRFAM: capsular exopolysaccharide family; KEGG: xce:Xcel_2854 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
  
  
 0.532
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.