STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_0824KEGG: bja:blr6992 hypothetical protein. (63 aa)    
Predicted Functional Partners:
Celf_0821
KEGG: response regulator receiver protein; PFAM: response regulator receiver; LmbE family protein; SMART: response regulator receiver.
       0.773
Celf_0822
PFAM: protein of unknown function DUF201; KEGG: protein of unknown function DUF201.
       0.773
Celf_0823
KEGG: PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein.
       0.773
Celf_0825
Response regulator receiver protein; KEGG: ade:Adeh_0639 two component, sigma54 specific, fis family transcriptional regulator; PFAM: response regulator receiver; SMART: response regulator receiver.
       0.773
Celf_0826
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
       0.773
Celf_0820
PFAM: Luciferase-like, subgroup; KEGG: luciferase-like, subgroup.
       0.487
Celf_0827
PFAM: FAD linked oxidase domain protein; KEGG: mgi:Mflv_4651 FAD linked oxidase domain-containing protein.
       0.476
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.