STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_0889PFAM: inner-membrane translocator; KEGG: xce:Xcel_0421 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family. (345 aa)    
Predicted Functional Partners:
Celf_0887
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: xce:Xcel_0419 periplasmic binding protein/LacI transcriptional regulator.
 0.998
Celf_0888
KEGG: xce:Xcel_0420 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.994
Celf_0890
PFAM: inner-membrane translocator; KEGG: xce:Xcel_0422 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.983
Celf_2987
KEGG: bgl:bglu_2g18470 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.868
Celf_2748
KEGG: xce:Xcel_2401 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.866
Celf_2746
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: kra:Krad_3728 periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.855
Celf_3492
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.829
Celf_2608
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.822
Celf_3495
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.793
Celf_2605
KEGG: bcv:Bcav_2994 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.779
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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