STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_0954KEGG: bcv:Bcav_3211 protein of unknown function DUF909; Belongs to the WXG100 family. (94 aa)    
Predicted Functional Partners:
Celf_0955
KEGG: bcv:Bcav_3210 protein of unknown function DUF909; Belongs to the WXG100 family.
  
 
 0.995
Celf_0644
KEGG: protein of unknown function DUF909; Belongs to the WXG100 family.
  
 
 0.986
Celf_0950
KEGG: bcv:Bcav_3214 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase.
 
 
 
 0.943
Celf_0960
PFAM: protein of unknown function DUF690; KEGG: bcv:Bcav_3203 protein of unknown function DUF690.
 
 
 0.915
Celf_0959
PFAM: protein of unknown function DUF571; KEGG: bcv:Bcav_3204 protein of unknown function DUF571.
 
   
 0.891
Celf_0952
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bcv:Bcav_3209 peptidase S8 and S53 subtilisin kexin sedolisin.
 
   
 0.865
Celf_0961
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bcv:Bcav_3202 peptidase S8 and S53 subtilisin kexin sedolisin.
 
   
 0.779
Celf_0614
KEGG: bcv:Bcav_3198 hypothetical protein.
  
     0.740
Celf_1557
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: cell division FtsK/SpoIIIE.
   
 
 0.681
Celf_2532
KEGG: cell division FtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase.
   
 
 0.670
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.