STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_1097KEGG: hypothetical protein. (127 aa)    
Predicted Functional Partners:
Celf_0258
PFAM: copper resistance protein CopC; KEGG: copper resistance protein CopC.
  
    0.825
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.792
Celf_2183
PFAM: cytochrome c class I; KEGG: cytochrome c class I.
  
     0.762
Celf_1098
PFAM: glycosyl transferase group 1; KEGG: glycosyl transferase group 1.
       0.752
Celf_2188
Hypothetical protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.750
Celf_0259
PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: cytochrome c oxidase caa3-type, assembly factor CtaG-related protein.
  
     0.727
Celf_0915
KEGG: ResB family protein.
  
     0.706
Celf_2222
PFAM: RDD domain containing protein; KEGG: RDD domain containing protein.
  
     0.696
Celf_2184
PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: Rieske (2Fe-2S) iron-sulfur domain protein.
  
     0.691
Celf_1689
PFAM: cytochrome oxidase assembly; KEGG: cytochrome oxidase assembly.
  
     0.643
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.