STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_1194KEGG: amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3. (337 aa)    
Predicted Functional Partners:
Celf_1192
KEGG: amino acid ABC transporter membrane protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.954
Celf_1193
Manually curated; PFAM: ABC transporter related; KEGG: amino acid ABC transporter ATP-binding protein; SMART: AAA ATPase.
 
 0.923
Celf_1572
KEGG: bcv:Bcav_2445 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.832
Celf_1190
TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase.
    0.824
Celf_1191
PFAM: protein of unknown function DUF1684; KEGG: xce:Xcel_3099 protein of unknown function DUF1684.
 
     0.808
Celf_1197
Alkanesulfonate monooxygenase; KEGG: flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like, subgroup.
 
    0.778
Celf_1189
PFAM: Luciferase-like, subgroup; KEGG: flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase.
    0.754
Celf_1195
PFAM: FAD dependent oxidoreductase; KEGG: glycine/D-amino acid oxidase, deaminating.
 
    0.681
Celf_1571
KEGG: bcv:Bcav_2446 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.644
Celf_1198
PFAM: Luciferase-like, subgroup; KEGG: flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase.
    0.613
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.