STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_1278PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kfl:Kfla_4674 binding-protein-dependent transport systems inner membrane component. (317 aa)    
Predicted Functional Partners:
Celf_1279
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_0065 binding-protein-dependent transport systems inner membrane component.
 
 0.970
Celf_1277
PFAM: extracellular solute-binding protein family 1; KEGG: xce:Xcel_0063 extracellular solute-binding protein family 1.
 
 
 0.938
Celf_1289
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component.
  
  
 
0.919
Celf_3250
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cms:CMS_0053 putative integral membrane binding-protein-dependent transport protein.
 
 0.865
Celf_3629
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC-type sugar transport system, permease component.
 
 0.863
Celf_1349
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_0236 binding-protein-dependent transport systems inner membrane component.
 
 
 0.857
Celf_0529
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: carbohydrate ABC transporter membrane protein.
 
 0.855
Celf_0884
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scb:SCAB_7351 putative integral membrane transport protein.
 
 0.855
Celf_2767
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_1757 binding-protein-dependent transport systems inner membrane component.
 
 0.855
Celf_0900
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jde:Jden_0511 binding-protein-dependent transport systems inner membrane component.
 
 0.854
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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