STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_1434KEGG: fal:FRAAL3340 aliphatic sulfonate ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (253 aa)    
Predicted Functional Partners:
Celf_1436
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_4420 binding-protein-dependent transport systems inner membrane component.
  
  0.994
Celf_1435
KEGG: kra:Krad_4421 extracellular solute-binding protein family 3.
 
  
  0.993
Celf_3339
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kfl:Kfla_0186 binding-protein-dependent transport systems inner membrane component.
  
  0.980
Celf_3338
KEGG: xce:Xcel_0436 hypothetical protein.
 
  
  0.958
Celf_1197
Alkanesulfonate monooxygenase; KEGG: flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like, subgroup.
 
  
  0.930
Celf_3462
PFAM: NADPH-dependent FMN reductase; KEGG: NADPH-dependent FMN reductase.
  
  
  0.916
ssuB
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
  
 
0.908
Celf_0819
PFAM: NADPH-dependent FMN reductase; KEGG: NADPH-dependent FMN reductase.
     
  0.900
Celf_1255
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
     0.878
Celf_0865
PFAM: protein of unknown function DUF214; KEGG: fre:Franean1_6962 hypothetical protein.
 
      0.856
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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