STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_1447PFAM: protein of unknown function DUF74; KEGG: rsa:RSal33209_2955 hypothetical protein; Belongs to the UPF0145 family. (128 aa)    
Predicted Functional Partners:
Celf_1451
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
    0.589
Celf_1448
KEGG: HhH-GPD family protein; TIGRFAM: HhH-GPD family protein; PFAM: HhH-GPD family protein.
       0.586
fbiD
2-phospho-L-lactate guanylyltransferase CofC; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
       0.586
Celf_1450
KEGG: LPPG:FO 2-phospho-L-lactate transferase; TIGRFAM: LPPG domain protein containing protein; PFAM: protein of unknown function UPF0052 and CofD.
       0.586
Celf_1452
PFAM: transport system permease protein; KEGG: transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.586
Celf_1453
PFAM: periplasmic binding protein; KEGG: periplasmic binding protein.
       0.586
Celf_1811
KEGG: glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein.
       0.410
Celf_3571
PFAM: protein of unknown function DUF1212; KEGG: protein of unknown function DUF1212.
       0.410
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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