STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_1496PFAM: nitrogen regulatory protein P-II; KEGG: nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (113 aa)    
Predicted Functional Partners:
Celf_1495
KEGG: nml:Namu_3149 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter.
 
 0.999
Celf_1497
Metal dependent phosphohydrolase; PFAM: GlnD PII-uridylyltransferase; protein of unknown function DUF294 nucleotidyltransferase; metal-dependent phosphohydrolase HD sub domain; KEGG: metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region.
 
 
 0.998
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
  
 
 
 0.958
Celf_3437
Histidine kinase; KEGG: fre:Franean1_2258 cyclic nucleotide-binding protein; PFAM: ATP-binding region ATPase domain protein; cyclic nucleotide-binding; SMART: ATP-binding region ATPase domain protein; cyclic nucleotide-binding.
  
 
 0.918
Celf_1811
KEGG: glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein.
 
  
 0.862
Celf_2223
KEGG: glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
 
  
 0.842
Celf_0046
KEGG: sro:Sros_5367 hypothetical protein.
    
 
 0.800
Celf_0110
KEGG: sgr:SGR_6341 hypothetical protein.
    
 
 0.800
Celf_1672
KEGG: xce:Xcel_1337 hypothetical protein.
    
 
 0.800
Celf_3446
KEGG: hypothetical protein.
    
 
 0.800
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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