STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_1723KEGG: band 7 protein; PFAM: band 7 protein; SMART: band 7 protein. (391 aa)    
Predicted Functional Partners:
Celf_1722
PFAM: protein of unknown function DUF107; KEGG: protein of unknown function DUF107.
 
  
 0.954
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.866
Celf_3460
KEGG: AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase; Belongs to the AAA ATPase family.
   
 0.866
Celf_0371
PFAM: protein of unknown function DUF179; KEGG: sco:SCO2948 hypothetical protein; Belongs to the UPF0301 (AlgH) family.
   
    0.723
arc
KEGG: AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
   
 
 0.699
Celf_1525
PFAM: GCN5-related N-acetyltransferase; KEGG: GCN5-related N-acetyltransferase.
  
    0.605
Celf_0023
KEGG: xce:Xcel_0012 rhomboid family protein; manually curated; PFAM: Rhomboid family protein.
   
 0.590
Celf_2376
KEGG: iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; SMART: iron dependent repressor.
   
    0.586
Celf_1725
KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
 
 0.575
Celf_1724
KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
 
 0.570
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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