STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2023PFAM: protein of unknown function DUF349; KEGG: protein of unknown function DUF349. (644 aa)    
Predicted Functional Partners:
Celf_1877
Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.875
Celf_2022
PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: peptidyl-prolyl cis-trans isomerase cyclophilin type.
  
   0.854
Celf_2150
KEGG: hypothetical protein.
  
     0.720
rbpA-2
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.705
Celf_2021
KEGG: beta-lactamase domain protein.
  
    0.665
Celf_2147
KEGG: hypothetical protein.
  
     0.665
Celf_2020
TIGRFAM: histidyl-tRNA synthetase; KEGG: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein.
 
    0.664
Celf_2220
KEGG: hypothetical protein.
  
     0.651
Celf_1937
SMART: regulatory protein MerR; KEGG: transcriptional regulator, MerR family.
  
     0.644
Celf_1355
KEGG: type III restriction protein res subunit; PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase.
  
  
 0.625
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.