STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2137PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: cai:Caci_8299 arginase/agmatinase/formiminoglutamase; Belongs to the arginase family. (298 aa)    
Predicted Functional Partners:
Celf_0743
KEGG: ornithine aminotransferase; TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.945
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
    
 0.928
Celf_1665
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
    
 0.924
argH
KEGG: argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase.
     
 0.855
arcA
KEGG: sco:SCO0613 arginine deiminase; PFAM: amidinotransferase.
    
 0.841
Celf_0074
TIGRFAM: histidine ammonia-lyase; KEGG: bcv:Bcav_1837 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase.
  
  
 0.760
Celf_1286
PFAM: Aldehyde Dehydrogenase; Proline dehydrogenase; KEGG: NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.707
Celf_2138
PFAM: Domain of unknown function DUF1801; KEGG: bcv:Bcav_0133 domain of unknown function DUF1801.
       0.668
Celf_2133
TIGRFAM: IMP dehydrogenase family protein; KEGG: IMP dehydrogenase family protein; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein.
    
  0.557
Celf_2136
PFAM: aminoglycoside phosphotransferase; KEGG: aminoglycoside phosphotransferase.
       0.548
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.