STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2421PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ATPase component of various ABC-type transport systems with duplicated ATPase domain; Belongs to the ABC transporter superfamily. (482 aa)    
Predicted Functional Partners:
Celf_2418
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
   
 0.977
Celf_1845
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component.
   
 0.976
Celf_2904
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_0959 binding-protein-dependent transport systems inner membrane component.
   
 0.975
Celf_0472
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sna:Snas_2621 binding-protein-dependent transport systems inner membrane component.
   
 0.970
Celf_2422
PFAM: extracellular solute-binding protein family 5; KEGG: ABC-type dipeptide transport system, periplasmic component.
    0.863
Celf_1844
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component.
   
 0.827
Celf_2417
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_0940 binding-protein-dependent transport systems inner membrane component.
   
 0.821
Celf_0471
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_1459 putative di/TRI-peptide transport system permease protein.
   
 0.731
Celf_2905
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_0958 binding-protein-dependent transport systems inner membrane component.
   
 0.669
Celf_1835
PFAM: inner-membrane translocator; KEGG: bcv:Bcav_2204 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.623
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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