STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2465KEGG: hypothetical protein. (277 aa)    
Predicted Functional Partners:
Celf_2464
KEGG: peptidoglycan-binding lysin domain protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
 
     0.879
Celf_2463
KEGG: hypothetical protein.
 
     0.753
Celf_2658
KEGG: acyl-CoA thioesterase I precursor.
  
     0.554
Celf_2462
KEGG: jde:Jden_1818 DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory.
  
     0.522
Celf_3098
KEGG: hypothetical protein.
  
     0.514
Celf_2460
KEGG: hypothetical protein.
  
     0.490
Celf_1565
KEGG: hypothetical protein.
  
     0.443
Celf_1623
KEGG: DivIVA domain protein; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein.
  
     0.438
Celf_2489
KEGG: hypothetical protein.
  
     0.400
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.