STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2499KEGG: LGFP repeat protein. (802 aa)    
Predicted Functional Partners:
Celf_2498
KEGG: hypothetical protein.
       0.791
Celf_2493
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
     
 0.528
Celf_2497
PFAM: NAD-dependent epimerase/dehydratase; KEGG: rer:RER_02510 NAD-dependent epimerase/dehydratase family protein.
       0.518
Celf_2494
KEGG: gob:Gobs_4293 hypothetical protein.
       0.515
Celf_2495
PFAM: GtrA family protein; KEGG: ami:Amir_0124 GtrA family protein.
       0.515
Celf_2496
PFAM: glycosyl transferase family 2; KEGG: rer:RER_02520 glycosyltransferase.
       0.515
Celf_2489
KEGG: hypothetical protein.
 
 
 
 0.478
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.