STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2502PFAM: glycosyl transferase family 2; KEGG: xce:Xcel_2568 glycosyl transferase family 2. (245 aa)    
Predicted Functional Partners:
Celf_2503
KEGG: xce:Xcel_2569 hypothetical protein.
 
   
 0.963
Celf_2500
PFAM: glycosyl transferase family 2; KEGG: predicted glycosyltransferase.
 
  
 0.739
Celf_2501
KEGG: polysaccharide biosynthesis protein.
  
  
 0.641
Celf_0722
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: xce:Xcel_2926 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.606
Celf_0206
PFAM: protein of unknown function DUF475; KEGG: hypothetical protein.
     
 0.552
Celf_2517
KEGG: nml:Namu_4204 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.539
Celf_2509
PFAM: glycosyl transferase group 1; KEGG: npu:Npun_F4534 methyltransferase type 11.
 
   0.535
Celf_2511
PFAM: glycosyl transferase family 2; KEGG: mea:Mex_1p0611 putative glycosyl transferase.
 
  
 0.525
Celf_2497
PFAM: NAD-dependent epimerase/dehydratase; KEGG: rer:RER_02510 NAD-dependent epimerase/dehydratase family protein.
  
 
 0.484
Celf_3608
PFAM: glycosyl transferase family 2; KEGG: glycosyl transferase family 2.
  
     0.470
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.