STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2557PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: bcv:Bcav_3850 acyl-CoA dehydrogenase domain protein. (391 aa)    
Predicted Functional Partners:
Celf_2127
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.
 0.986
Celf_2758
KEGG: electron transfer flavoprotein alpha/beta-subunit; manually curated; PFAM: Electron transfer flavoprotein alpha/beta-subunit.
 
 0.971
Celf_2559
KEGG: art:Arth_1385 propionyl-CoA carboxylase; PFAM: carboxyl transferase.
 
 0.962
Celf_2757
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: electron transfer flavoprotein alpha subunit.
 
 0.955
Celf_2634
PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: acyl-CoA dehydrogenase domain protein.
  
  
 
0.924
Celf_2556
PFAM: MaoC domain protein dehydratase; KEGG: ach:Achl_1408 MaoC domain protein dehydratase.
 
 0.904
Celf_2633
PFAM: aminoglycoside phosphotransferase; KEGG: ami:Amir_3460 aminoglycoside phosphotransferase.
 
 
 0.902
Celf_2558
PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: rha:RHA1_ro06096 acetyl-CoA carboxylase biotin carboxylase subunit.
 
 
 0.843
Celf_2555
PFAM: HpcH/HpaI aldolase; KEGG: krh:KRH_22730 putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.841
Celf_2566
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: art:Arth_2986 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.799
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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