STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2592KEGG: kfl:Kfla_0671 hydrolase, HAD-superfamily, subfamily IIIA; TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; histidinol-phosphate phosphatase family protein; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: glycosyl transferase family 2; Haloacid dehalogenase domain protein hydrolase. (505 aa)    
Predicted Functional Partners:
Celf_2596
PFAM: sugar isomerase (SIS); KEGG: sco:SCO6186 phosphoheptose isomerase.
  
 0.993
Celf_2593
PFAM: glycosyl transferase family 9; KEGG: sco:SCO6183 transferase.
   
 0.988
Celf_2597
Cytidyltransferase-related domain protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
   
 0.970
Celf_2594
PFAM: glycosyl transferase group 1; KEGG: kfl:Kfla_0673 glycosyl transferase, group 1.
 
  
 0.962
Celf_2595
PFAM: glycosyl transferase group 1; KEGG: rxy:Rxyl_0713 glycosyl transferase, group 1.
  
 0.962
Celf_2591
PFAM: Carbamoyltransferase; KEGG: carbamoyltransferase.
 
    0.961
Celf_2599
PFAM: glycosyl transferase family 9; KEGG: kfl:Kfla_0678 glycosyl transferase family 9.
 
   
 0.948
Celf_2598
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kfl:Kfla_0677 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.913
Celf_1919
KEGG: PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein.
    
 0.893
Celf_0722
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: xce:Xcel_2926 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
  
  
 0.866
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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