STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2649PFAM: protein of unknown function DUF21; CBS domain containing protein; KEGG: protein of unknown function DUF21. (347 aa)    
Predicted Functional Partners:
Celf_2650
PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: protein of unknown function DUF21.
 
   
0.905
Celf_3561
PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: CBS domain-containing protein.
 
   
0.598
Celf_2345
KEGG: CBS domain containing protein; PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein.
 
   
0.514
Celf_2654
KEGG: jde:Jden_1805 hypothetical protein.
  
    0.473
Celf_2652
KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein.
  
    0.459
Celf_2651
KEGG: two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
  
    0.451
Celf_2653
ABC transporter related protein; KEGG: ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase.
  
    0.442
Celf_2655
KEGG: 2-oxoglutarate dehydrogenase, E1 subunit; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component; catalytic domain-containing protein of components of various dehydrogenase complexes.
 
    0.422
Celf_2648
PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin.
       0.411
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.