STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2696KEGG: hypothetical protein. (223 aa)    
Predicted Functional Partners:
Celf_0587
KEGG: bcv:Bcav_0753 hypothetical protein.
  
     0.653
Celf_0588
KEGG: bcv:Bcav_4067 membrane protein of uknown function UCP014873.
  
     0.574
Celf_2235
KEGG: bcv:Bcav_0679 hypothetical protein.
  
     0.534
Celf_2209
KEGG: hypothetical protein.
  
     0.523
Celf_2100
KEGG: rop:ROP_36250 hypothetical protein.
 
     0.462
Celf_1763
KEGG: msm:MSMEG_3014 hypothetical protein.
  
     0.460
Celf_1164
KEGG: kra:Krad_1168 hypothetical protein.
  
     0.416
Celf_0365
PFAM: regulatory protein TetR; KEGG: transcriptional regulator, TetR family.
  
     0.404
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.