STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2847PFAM: NUDIX hydrolase; KEGG: NUDIX hydrolase. (182 aa)    
Predicted Functional Partners:
Celf_2845
Maf protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
      0.943
Celf_2846
PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: carbamoyl-phosphate synthase L chain ATP-binding protein.
      0.799
Celf_0220
KEGG: hypothetical protein.
  
    0.635
Celf_1739
PFAM: dihydrodipicolinate synthetase; KEGG: dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
 
    0.506
Celf_2848
PFAM: iron permease FTR1; KEGG: high-affinity Fe2+/Pb2+ permease.
       0.470
Celf_1618
PFAM: Polypeptide-transport-associated domain protein FtsQ-type; cell division protein FtsQ; KEGG: polypeptide-transport-associated domain protein FtsQ-type.
  
     0.441
Celf_2840
PFAM: carboxyl transferase; KEGG: carboxyl transferase.
 
      0.427
Celf_2777
PFAM: Apolipoprotein A1/A4/E; KEGG: hypothetical protein.
  
     0.407
Celf_0838
KEGG: flp pilus assembly protein FlpE.
  
    0.406
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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