STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2875PFAM: aminoglycoside phosphotransferase; KEGG: bcv:Bcav_2954 aminoglycoside phosphotransferase. (256 aa)    
Predicted Functional Partners:
Celf_2756
PFAM: aminoglycoside phosphotransferase; KEGG: aminoglycoside phosphotransferase.
 
     0.647
Celf_3489
PFAM: aminoglycoside phosphotransferase; KEGG: Mn2+dependent serine/threonine protein kinase.
 
     0.551
Celf_2873
KEGG: aau:AAur_pTC10051 transposase; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
       0.543
Celf_2874
PFAM: Integrase catalytic region; Sigma-70 region 4 type 2; KEGG: saq:Sare_4926 integrase catalytic region.
       0.543
Celf_1772
PFAM: NAD-dependent epimerase/dehydratase; KEGG: bcv:Bcav_2854 NAD-dependent epimerase/dehydratase.
  
    0.521
Celf_0123
KEGG: bcv:Bcav_0741 protein of unknown function DUF664.
  
     0.462
Celf_0959
PFAM: protein of unknown function DUF571; KEGG: bcv:Bcav_3204 protein of unknown function DUF571.
  
     0.449
Celf_1086
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
    0.445
Celf_0960
PFAM: protein of unknown function DUF690; KEGG: bcv:Bcav_3203 protein of unknown function DUF690.
  
     0.444
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.444
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.