STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2904PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_0959 binding-protein-dependent transport systems inner membrane component. (351 aa)    
Predicted Functional Partners:
Celf_0470
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: sna:Snas_2623 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 0.990
Celf_0473
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: sna:Snas_2620 oligopeptide/dipeptide ABC transporter ATPase subunit; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 0.990
Celf_2902
KEGG: xce:Xcel_0961 ABC transporter related protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 0.985
Celf_1846
KEGG: ABC transporter related protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 0.983
Celf_2421
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ATPase component of various ABC-type transport systems with duplicated ATPase domain; Belongs to the ABC transporter superfamily.
   
 0.975
Celf_2905
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_0958 binding-protein-dependent transport systems inner membrane component.
  
 0.973
Celf_1844
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component.
  
 0.931
Celf_2417
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_0940 binding-protein-dependent transport systems inner membrane component.
  
 0.911
Celf_2906
PFAM: extracellular solute-binding protein family 5; KEGG: xce:Xcel_0957 extracellular solute-binding protein family 5.
 
 
 0.909
Celf_0471
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_1459 putative di/TRI-peptide transport system permease protein.
  
 0.902
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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