STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_2939KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase. (240 aa)    
Predicted Functional Partners:
Celf_0865
PFAM: protein of unknown function DUF214; KEGG: fre:Franean1_6962 hypothetical protein.
 
 0.967
Celf_1142
PFAM: protein of unknown function DUF214; KEGG: protein of unknown function DUF214.
 
 0.888
Celf_2937
PFAM: protein of unknown function DUF214; KEGG: protein of unknown function DUF214.
 
 
 0.857
Celf_2936
PFAM: protein of unknown function DUF214; KEGG: protein of unknown function DUF214.
 
   0.856
Celf_1255
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
 0.843
Celf_2938
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    
0.798
Celf_0016
KEGG: cmi:CMM_0938 putative multidrug export ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    
0.796
Celf_1685
TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: kra:Krad_3923 daunorubicin resistance ABC transporter ATPase subunit; SMART: AAA ATPase.
 
    
0.765
Celf_2531
PFAM: protein of unknown function DUF214; KEGG: protein of unknown function DUF214.
 
 0.731
Celf_1896
PFAM: protein of unknown function DUF214; KEGG: protein of unknown function DUF214.
 
   0.730
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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