STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Celf_3003Biphenyl-2,3-diol 1,2-dioxygenase; KEGG: ach:Achl_3544 catechol 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase. (341 aa)    
Predicted Functional Partners:
Celf_2386
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: predicted ring-cleavage extradiol dioxygenase.
  
  
 0.916
Celf_3002
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rxy:Rxyl_2238 fumarylacetoacetate (FAA) hydrolase.
 
  
 0.872
Celf_3001
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: ach:Achl_2699 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.794
Celf_2127
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.
  
  
 0.718
Celf_2076
KEGG: nfa:nfa27750 putative hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase.
  
     0.713
Celf_2559
KEGG: art:Arth_1385 propionyl-CoA carboxylase; PFAM: carboxyl transferase.
  
  
 0.657
Celf_2840
PFAM: carboxyl transferase; KEGG: carboxyl transferase.
  
  
 0.657
Celf_2073
KEGG: krh:KRH_22040 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
    0.616
Celf_2069
Tryptophan 5-monooxygenase; KEGG: bcv:Bcav_3578 tyrosine 3-monooxygenase; PFAM: Aromatic amino acid hydroxylase-like.
  
  
 0.598
Celf_0087
KEGG: nar:Saro_3181 hypothetical protein.
  
  
 0.597
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.