STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_3247PFAM: GCN5-related N-acetyltransferase; KEGG: nca:Noca_2371 GCN5-related N-acetyltransferase. (173 aa)    
Predicted Functional Partners:
Celf_3248
KEGG: rha:RHA1_ro06431 hypothetical protein.
  
    0.776
Celf_3246
PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rRNA methylase.
       0.773
Celf_0564
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sma:SAV_733 hypothetical protein.
  
     0.572
Celf_3242
KEGG: sco:SCO7546 lipoprotein.
       0.493
Celf_3243
KEGG: hypothetical protein.
       0.493
Celf_3244
KEGG: cwo:Cwoe_3918 phosphoenolpyruvate-protein phosphotransferase.
       0.493
Celf_3245
KEGG: hypothetical protein.
       0.493
Celf_3249
alpha-L-arabinofuranosidase domain protein; KEGG: aau:AAur_0688 alpha-L-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; SMART: alpha-L-arabinofuranosidase domain protein.
       0.461
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.