STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_3273PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component. (308 aa)    
Predicted Functional Partners:
Celf_3274
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component.
 
  0.991
Celf_3272
PFAM: extracellular solute-binding protein family 1; KEGG: bcv:Bcav_3323 extracellular solute-binding protein family 1.
 
  0.987
Celf_1749
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_2785 binding-protein-dependent transport systems inner membrane component.
 
  0.963
Celf_2789
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC-type polysaccharide transport system, permease component.
  0.963
Celf_2790
PFAM: extracellular solute-binding protein family 1; KEGG: ABC-type sugar transport system, periplasmic component.
 
  0.932
Celf_1748
PFAM: extracellular solute-binding protein family 1; KEGG: xce:Xcel_2784 extracellular solute-binding protein family 1.
 
  0.921
Celf_1750
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_2786 binding-protein-dependent transport systems inner membrane component.
  
  
 
0.917
Celf_2788
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: carbohydrate ABC transporter membrane protein.
  
  
 
0.915
Celf_3324
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: carbohydrate ABC transporter membrane protein.
   0.797
Celf_3630
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: permease component of ABC-type sugar transporter.
   0.785
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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