STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_3277KEGG: acetyl esterase (deacetylase); PFAM: Acetyl xylan esterase. (330 aa)    
Predicted Functional Partners:
Celf_2961
Cephalosporin-C deacetylase; KEGG: acetyl xylan esterase; PFAM: Acetyl xylan esterase.
  
  
 
0.903
Celf_3272
PFAM: extracellular solute-binding protein family 1; KEGG: bcv:Bcav_3323 extracellular solute-binding protein family 1.
 
     0.599
Celf_3274
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component.
 
     0.573
Celf_3276
KEGG: transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI.
       0.556
Celf_3273
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component.
 
     0.522
Celf_0859
KEGG: hypothetical protein.
  
     0.494
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.