STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_3325PFAM: extracellular solute-binding protein family 1; KEGG: xce:Xcel_0897 extracellular solute-binding protein family 1. (439 aa)    
Predicted Functional Partners:
Celf_3324
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: carbohydrate ABC transporter membrane protein.
 
   0.926
Celf_3323
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_0899 binding-protein-dependent transport systems inner membrane component.
 
 
 0.919
Celf_3334
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xce:Xcel_2535 binding-protein-dependent transport systems inner membrane component.
 
   0.851
Celf_3335
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: carbohydrate ABC transporter membrane protein.
 
 
 0.839
Celf_3320
PFAM: Oxidoreductase domain; oxidoreductase domain protein; KEGG: xce:Xcel_2657 oxidoreductase domain protein.
 
     0.706
Celf_3319
KEGG: hypothetical protein.
  
     0.686
Celf_3440
KEGG: ach:Achl_0488 FG-GAP repeat protein.
  
    0.620
Celf_3296
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: xce:Xcel_0895 xylose isomerase domain protein TIM barrel.
 
    0.617
Celf_3252
PFAM: extracellular solute-binding protein family 1; KEGG: cms:CMS_0051 putative extracellular solute-binding protein.
  
   
 0.598
Celf_0798
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bde:BDP_1704 sugar-binding protein of ABC transporter system, permease.
  
 
 0.550
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.