STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_3338KEGG: xce:Xcel_0436 hypothetical protein. (386 aa)    
Predicted Functional Partners:
Celf_3339
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kfl:Kfla_0186 binding-protein-dependent transport systems inner membrane component.
 
 
 0.998
ssuB
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.998
Celf_1436
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_4420 binding-protein-dependent transport systems inner membrane component.
 
 
 0.992
Celf_3462
PFAM: NADPH-dependent FMN reductase; KEGG: NADPH-dependent FMN reductase.
 
 
  0.966
Celf_1197
Alkanesulfonate monooxygenase; KEGG: flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase; PFAM: Luciferase-like, subgroup.
 
 
  0.958
Celf_1434
KEGG: fal:FRAAL3340 aliphatic sulfonate ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
  0.958
Celf_3341
TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; KEGG: scl:sce0168 monooxygenase.
 
    0.945
Celf_1435
KEGG: kra:Krad_4421 extracellular solute-binding protein family 3.
  
  
  0.944
Celf_0819
PFAM: NADPH-dependent FMN reductase; KEGG: NADPH-dependent FMN reductase.
  
 
  0.928
Celf_1459
KEGG: ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.801
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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