STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Celf_3453KEGG: hypothetical protein. (433 aa)    
Predicted Functional Partners:
Celf_2660
KEGG: hypothetical protein.
  
     0.614
Celf_2937
PFAM: protein of unknown function DUF214; KEGG: protein of unknown function DUF214.
  
     0.544
Celf_2936
PFAM: protein of unknown function DUF214; KEGG: protein of unknown function DUF214.
  
     0.474
Celf_0957
PFAM: RDD domain containing protein; Forkhead-associated protein; KEGG: RDD domain containing protein.
  
     0.465
Celf_3452
KEGG: rsh:Rsph17029_2323 hypothetical protein.
       0.438
Celf_0547
KEGG: hypothetical protein.
  
     0.413
Celf_0859
KEGG: hypothetical protein.
  
     0.412
Celf_1465
KEGG: ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
  
     0.410
Celf_2013
PFAM: protein of unknown function DUF948; KEGG: hypothetical protein.
  
     0.410
Celf_3397
KEGG: xce:Xcel_0213 hypothetical protein.
  
     0.402
Your Current Organism:
Cellulomonas fimi
NCBI taxonomy Id: 590998
Other names: C. fimi ATCC 484, Cellulomonas fimi ATCC 484, Cellulomonas fimi DSM 20113, Cellulomonas fimi str. ATCC 484, Cellulomonas fimi strain ATCC 484
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.